CDS

Accession Number TCMCG023C15146
gbkey CDS
Protein Id PIN12083.1
Location complement(5373..6812)
Organism Handroanthus impetiginosus
locus_tag CDL12_15307

Protein

Length 479aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA324125, BioSample:SAMN05195323
db_source NKXS01002796.1
Definition RNA Methylase, SpoU family [Handroanthus impetiginosus]
Locus_tag CDL12_15307

EGGNOG-MAPPER Annotation

COG_category A
Description rRNA methyltransferase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K15507        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000154        [VIEW IN EMBL-EBI]
GO:0000451        [VIEW IN EMBL-EBI]
GO:0000453        [VIEW IN EMBL-EBI]
GO:0001510        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008168        [VIEW IN EMBL-EBI]
GO:0008171        [VIEW IN EMBL-EBI]
GO:0008173        [VIEW IN EMBL-EBI]
GO:0008649        [VIEW IN EMBL-EBI]
GO:0008757        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016435        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016741        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0031167        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070039        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140102        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGAGGTATTTTAACCCTTCAAAGCCCCTTTCTGTGGTTGCTGGCTGCCATTTAGGTCCTGGGTCCAATAAAAAAAACTGGGAACAAATTGAAATTTTAGGAGCCAGAAATAGGAGGAAAAGTTGTTTCTTGAATTATTCACTATTGGGAGATAGGAGGTTTTCCACTTCAAACTCAAAGAAGGCGGGCGAAAGGAGTGGAGATCCCCTTCCTTGGTTAACTGCATCCATGAAAGGGGAACAAAGAAAAGTTGGAAATGAGACAGGTAAAGGGATCAGGTCTTCGTGGGAGGAATCAGCAGAAAAGTTTCTAAAAAGTGGTGCATCCACAGCGGGAGTTAGAGAAACTCGTAAACCTGAAAGTAGGAGAAATGAGTTTAGGAATAAAGAGATTACTCGTATTGAAGATGAAGAAGAGGACGAGGATGTTGAGACTGTTAATGATCCTAGATGGTCTAACATTAGGAATAAGTTCAACAACTTTGCCGAGGTAAAACCTGGGTTGGATAGAGCAGATGTCAGGAGATGGGTTAAACAAGAAAACTGGGGTAGGAAAACATGGAAAGAAGCCAAGGAATCTACAGTGCCAAAGATAGTAGGAGAAGGGATCTACGGAGTTGGTCCTGTTCTAGCTGCGCTTTGTGCTGGGCGAAGAGAATTCTATGCGTTGTATGTGCAGGAAGGTTTGGATTTGAGTACTAATAACAAGAAGAAGAAGGATAAAAAAGGTTTTGAGAAAGTTCTGAAGATGGCGGAAAAGATAGGATTAAGCAAAAAAGAGGTATCCAAGCATGATCTCAACATGGTTGTTGATAACAGACCTCATCAGGGCTTGGTCCTGGATGCTTCACCGCTGGAAATGGTTGGTATAAAGGAGTTGGAACCGGTTTCCATTGAGGGAGAAAAAGGCCCTCTTTGGTTGGCGTTGGATGAGGTTACTGATCCTCAGAATTTAGGGGCAATCATTCGTTCTGCTTACTTCTTTGGAGCTTCCGGAGTAGTGTTGTGTGCTAAGAACTCAGCTCCACTAAGTGGTGTTGTGAGCAAAGCCAGTGCAGGCTCACTTGAACTAATGGAGCTTAGATCTTGCAAGAATATGATGCAGTTCTTGGCATCCTCAGCTGGAAATGGTTGGCGGGTACTTGGTGGCTCAGTTTCTCCTAGAGCCGTTCCTTTGAGTGAAATTGTGCCCGGTGTTCCCACAATCCTGGTTCTAGGCAGTGAGGGCACTGGTTTGAGGCCATTGGTCGAAAGATCTTGCACTCAGTTAATTAGAATTCCAGGAAATCTACCAGTCGATGTGGTAATGACAGGGGATGAAGATATGGAAAGTGTTGAGAATCCAGGTCAAGAGTTCAGGTCCTTTCTGGCAGTGGAGAGCTTGAACGTAAGCGTTGCAGCTGGCGTTCTGCTTAATCACTTGATTGGAAACAACTAA
Protein:  
MSRYFNPSKPLSVVAGCHLGPGSNKKNWEQIEILGARNRRKSCFLNYSLLGDRRFSTSNSKKAGERSGDPLPWLTASMKGEQRKVGNETGKGIRSSWEESAEKFLKSGASTAGVRETRKPESRRNEFRNKEITRIEDEEEDEDVETVNDPRWSNIRNKFNNFAEVKPGLDRADVRRWVKQENWGRKTWKEAKESTVPKIVGEGIYGVGPVLAALCAGRREFYALYVQEGLDLSTNNKKKKDKKGFEKVLKMAEKIGLSKKEVSKHDLNMVVDNRPHQGLVLDASPLEMVGIKELEPVSIEGEKGPLWLALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELMELRSCKNMMQFLASSAGNGWRVLGGSVSPRAVPLSEIVPGVPTILVLGSEGTGLRPLVERSCTQLIRIPGNLPVDVVMTGDEDMESVENPGQEFRSFLAVESLNVSVAAGVLLNHLIGNN